Repository details

SoyBase

Name of repository
SoyBase
Additional name(s)
  • SoyBase and the Soybean Breeder's Toolbox
Repository URL
https://soybase.org/
Subject(s)
Description
SoyBase is a professionally curated repository for genetics, genomics and related data resources for soybean. It contains current genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits. SoyBase includes annotated "Williams 82" genomic sequence and associated data mining tools. The repository maintains controlled vocabularies for soybean growth, development, and traits that are linked to more general plant ontologies.
Contact
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
  • RRID:nif-0000-03483
  • RRID:SCR_005096
  • FAIRsharing_doi:10.25504/FAIRsharing.z4agsr
  • OMICS_02778
  • MIR:00000291
Repository type(s)
  • disciplinary
Mission statement for designated community
https://soybase.org/sb_about.php
Research data repository language(s)
  • English
Data and/or service provider
  • data provider
Institution name
Iowa State University
Identifier(s)
  • RRID:SCR_000972
  • RRID:nlx_75450
  • ROR:04rswrd78
Contact(s)
Country
United States
Type(s) of responsibility
  • sponsoring
Type of institution
non-profit
Institution name
United States Department of Agriculture, Agricultural Research Service
Additional name(s)
  • USDA-ARS
Identifier(s)
  • ROR:02d2m2044
  • RRID:SCR_011752
Contact(s)
Country
United States
Type(s) of responsibility
  • general
  • technical
  • sponsoring
Type of institution
non-profit

Database access

Type of access to research data repository
open

Data access (1)

Type of access to data
open

Data licenses (2)

DataLicense
other
DataLicense
Public Domain

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • registration

Data upload license (1)

Data upload license name
Data Submission Templates and Instructions
Persistent identifier system(s)
  • none
Name of the repository software
  • unknown
Data citation guideline
https://www.soybase.org/citation_guide.php
Enhanced Publication
yes
Quality management
yes

Alerting services (1)

Type of alerting service
RSS

Remarks

Remarks
SoyBase also contains the well-annotated ‘Williams 82’ genomic sequence and associated data mining tools.
Entry date
2014-07-10
Last update
2023-10-12
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Cite this re3data.org record:

re3data.org: SoyBase; editing status 2023-10-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3S032 last accessed: 2024-04-25