Repository details
BIGG Database
Name of repository
BIGG Database
Additional name(s)
- Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions
Repository URL
Subject(s)
Description
BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. BiGG integrates several published genome-scale metabolic networks into one resource with standard nomenclature which allows components to be compared across different organisms. BiGG can be used to browse model content, visualize metabolic pathway maps, and export SBML files of the models for further analysis by external software packages. Users may follow links from BiGG to several external databases to obtain additional information on genes, proteins, reactions, metabolites and citations of interest.
Contact(s)
- administrative: invent@ucsd.edu
Keyword(s)
Persistent identifier(s) of the repository
Repository size
over 5.000 metabolites: 10.000 reactions; 2.000 human genes
Repository type(s)
- disciplinary
Research data repository language(s)
- English
Data and/or service provider
- dataProvider
Institutions (2)
Country
Type(s) of responsibility
- general
Type of institution
non-profit
Additional name(s)
- Systems Biology Research Group
Country
Type(s) of responsibility
- technical
Type of institution
non-profit
Policies (1)
Policy Name
Database access
Type of access to research data repository
open
Database licenses (1)
Database License
Data access (1)
Type of access to data
open
Data licenses (1)
DataLicense
Data upload (1)
Type of data upload
closed
Persistent identifier system(s)
- none
Versioning
yes
Quality management
yes
Application programming interfaces (1)
Remarks
Entry date
2015-02-24
Last update
2025-08-29
Cite this re3data.org record:
re3data.org: BIGG Database; editing status 2025-08-29; re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3MG9M last accessed: 2025-09-18- Current projects
- EOSC FAIR-IMPACT
-
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2025-09-18
