Repository details

Plant Genomics and Phenomics Research Data Repository

Name of repository
Plant Genomics and Phenomics Research Data Repository
Additional name(s)
  • PGP Repository
Repository URL
https://edal-pgp.ipk-gatersleben.de/
Subject(s)
Description
The Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) and German Plant Phenotyping Network (DPPN) has jointly initiated the Plant Genomics and Phenomics Research Data Repository (PGP) as infrastructure to comprehensively publish plant research data. This covers in particular cross-domain datasets that are not being published in central repositories because of its volume or unsupported data scope, like image collections from plant phenotyping and microscopy, unfinished genomes, genotyping data, visualizations of morphological plant models, data from mass spectrometry as well as software and documents.
Contact
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
  • OMICS_13414
  • FAIRsharing_doi:10.25504/FAIRsharing.rf3m4g
Repository size
250 datasets
Repository type(s)
  • disciplinary
  • institutional
Mission statement for designated community
https://edal-pgp.ipk-gatersleben.de/whatis.html
Research data repository language(s)
  • English
  • German
Data and/or service provider
  • data provider
  • service provider
Institution name
German Network for Bioinformatics Infrastructure
Additional name(s)
  • de.NBI
Country
Germany
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
German Plant Phenotyping Network
Additional name(s)
  • Deutsches Pflanzen Phänotypisierungsnetzwerk
  • DPPN
Country
Germany
Type(s) of responsibility
  • general
Type of institution
non-profit
End date of responsibility
2022
Institution name
Land Sachsen-Anhalt
Country
Germany
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
Leibniz Institute of Plant Genetics and Crop Plant Research
Additional name(s)
  • Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung
  • IPK
Identifier(s)
  • ROR:02skbsp27
Contact(s)
  • arendd@ipk-gatersleben.de
Country
Germany
Type(s) of responsibility
  • general
  • technical
Type of institution
non-profit

Policies (2)

Policy Name
License and Disclaimer
Policy Name
Technology transfer

Database access

Type of access to research data repository
open

Data access (1)

Type of access to data
open

Data licenses (2)

DataLicense
CC
DataLicense
other

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • institutional membership

Data upload license (1)

Data upload license name
Creative Commons Licenses
Persistent identifier system(s)
  • DOI
Name of the repository software
  • other
Versioning
yes
Enhanced Publication
yes
Quality management
yes

Application programming interfaces (1)

API type
other

Metadata standards (2)

Metadata standard name
Dublin Core
Metadata standard scheme
DCC
Metadata standard name
DataCite Metadata Schema
Metadata standard scheme
DCC

Remarks

Remarks
The Federal ex situ Genebank for agricultural and horticultural crops of the IPK Gatersleben forms an essential component for the implementation of both national and international policy on conservation and and sustainable utilization of plant genetic resources. The Genebank Information System (https://www.ipk-gatersleben.de/en/research/genebank) GBIS maps all processes and documents information related to conservation management and the distribution of material. In addition GBIS represents and interface for exchange of data with national and international databases.
Entry date
2015-11-04
Last update
2022-08-18
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Cite this re3data.org record:

re3data.org: Plant Genomics and Phenomics Research Data Repository; editing status 2022-08-18; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WD2R last accessed: 2024-04-19