Repository details
KBase
Name of repository
KBase
Additional name(s)
- KBase: The U.S. Department of Energy Systems Biology Knowledgebase
Repository URL
Subject(s)
Description
The Department of Energy Systems Biology Knowledgebase (KBase) is a software and data platform designed to meet the grand challenge of systems biology: predicting and designing biological function. KBase integrates data and tools in a unified graphical interface so users do not need to access them from numerous sources or learn multiple systems in order to create and run sophisticated systems biology workflows. Users can perform large-scale analyses and combine multiple lines of evidence to model plant and microbial physiology and community dynamics.
KBase is the first large-scale bioinformatics system that enables users to upload their own data, analyze it (along with collaborator and public data), build increasingly realistic models, and share and publish their workflows and conclusions. KBase aims to provide a knowledgebase: an integrated environment where knowledge and insights are created and multiplied.
Contact
- https://www.kbase.us/support/
- engage@kbase.us
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
- OMICS_13621
- FAIRsharing_doi:10.25504/FAIRsharing.jsxqrk
Repository size
90.279 genomes; 358.269.132 genome geatures; 1.554.540 taxonomy; 27.692 biochemical species; 34.696 Reactions; 20.551 Roles; 522 Media; 75 Metabolic Maps; 1.470 Metabolic Pathways
Repository type(s)
- disciplinary
Mission statement for designated community
Research data repository language(s)
- English
Data and/or service provider
- data provider
Institution name
Identifier(s)
- ROR:org/01bj3aw27
- RRID:SCR_012841
- RRID:nlx_86742
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Institution name
Additional name(s)
- BER
Country
Type(s) of responsibility
- general
Type of institution
non-profit
Policies (3)
Database access
Type of access to research data repository
open
Database licenses (1)
Database License
Data access (4)
Type of access to data
restricted
Data access restriction type(s)
- other
Type of access to data
embargoed
Type of access to data
closed
Type of access to data
open
Data licenses (4)
Data upload (1)
Type of data upload
restricted
Data upload restriction type(s)
- registration
Persistent identifier system(s)
- none
Name of the repository software
- unknown
Data citation guideline
Enhanced Publication
yes
Quality management
unknown
Remarks
Entry date
2018-09-12
Last update
2024-04-17
Cite this re3data.org record:
re3data.org: KBase; editing status 2024-04-17; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3MB8V last accessed: 2024-04-20- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
-
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has waived all copyright and related or neighboring rights to
the database entries of re3data.org.
-
Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-04-20
