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Found 57 result(s)
Chempound is a new generation repository architecture based on RDF, semantic dictionaries and linked data. It has been developed to hold any type of chemical object expressible in CML and is exemplified by crystallographic experiments and computational chemistry calculations. In both examples, the repository can hold >50k entries which can be searched by SPARQL endpoints and pre-indexing of key fields. The Chempound architecture is general and adaptable to other fields of data-rich science. The Chempound software is hosted at http://bitbucket.org/chempound and is available under the Apache License, Version 2.0
---<<< This repository is no longer available. This record is out-dated >>>--- The ONS challenge contains open solubility data, experiments with raw data from different scientists and institutions. It is part of the The Open Notebook Science wiki community, ideally suited for community-wide collaborative research projects involving mathematical modeling and computer simulation work, as it allows researchers to document model development in a step-by-step fashion, then link model prediction to experiments that test the model, and in turn, use feeback from experiments to evolve the model. By making our laboratory notebooks public, the evolutionary process of a model can be followed in its totality by the interested reader. Researchers from laboratories around the world can now follow the progress of our research day-to-day, borrow models at various stages of development, comment or advice on model developments, discuss experiments, ask questions, provide feedback, or otherwise contribute to the progress of science in any manner possible.
The Deep Blue Data repository is a means for University of Michigan researchers to make their research data openly accessible to anyone in the world, provided they meet collections criteria. Submitted data sets undergo a curation review by librarians to support discovery, understanding, and reuse of the data.
Yoda publishes research data on behalf of researchers that are affiliated with Utrecht University, its research institutes and consortia where it acts as a coordinating body. Data packages are not limited to a particular field of research or license. Yoda publishes data packages via Datacite. To find data publications use: https://public.yoda.uu.nl/ , or the Datacite search engine: https://search.datacite.org/repositories/delft.uu
The European Database of Seismogenic Faults (EDSF) was compiled in the framework of the EU Project SHARE, Work Package 3, Task 3.2. EDSF includes only faults that are deemed to be capable of generating earthquakes of magnitude equal to or larger than 5.5 and aims at ensuring a homogeneous input for use in ground-shaking hazard assessment in the Euro-Mediterranean area. Several research institutions participated in this effort with the contribution of many scientists (see the Database section for a full list). The EDSF database and website are hosted and maintained by INGV.
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The BCDC serves the research data obtained, and the data syntheses assembled, by researchers within the Bjerknes Centre for Climate Research. Furthermore it is open for all interested scientists independent of institution. All data from the different disciplines (e.g. geology, oceanography, biology, model community) will be archived in a long-term repository, interconnected and made publicly available by the BCDC. BCDC has collaborations with many international data repositories and actively archives metadata and data at those ensuring quality and FAIRness. BCDC has it's main focus on services for data management for external and internal funded projects in the field of climate research, provides data management plans and ensures that data is archived accordingly according to the best practices in the field. The data management services rank from project work for small external funded project to top-of-the-art data management services for research infrastructures on the ESFRI roadmap (e.g. RI ICOS – Integrated Carbon Observation System) and for provides products and services for Copernicus Marine Environmental Monitoring Services. In addition BCDC is advising various communities on data management services e.g. IOC UNESCO, OECD, IAEA and various funding agencies. BCDC will become an Associated Data Unit (ADU) under IODE, International Oceanographic Data and Information Exchange, a worldwide network that operates under the auspices of the Intergovernmental Oceanographic Commission of UNESCO and aims at becoming a part of ICSU World Data System.
JASPAR is the leading open-access database of matrix profiles describing the DNA-binding patterns of transcription factors and other proteins interacting with DNA in a sequence-specific manner.
Scholars' Mine is an online collection of scholarly and creative works produced by the faculty, staff, and students of the Missouri University of Science and Technology.
Our knowledge of the many life-forms on Earth - of animals, plants, fungi, protists and bacteria - is scattered around the world in books, journals, databases, websites, specimen collections, and in the minds of people everywhere. Imagine what it would mean if this information could be gathered together and made available to everyone – anywhere – at a moment’s notice. This dream is becoming a reality through the Encyclopedia of Life.
The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. The UniProt databases are the UniProt Knowledgebase (UniProtKB), the UniProt Reference Clusters (UniRef), and the UniProt Archive (UniParc).
Greengenes is an Earth Sciences website that assists clinical and environmental microbiologists from around the globe in classifying microorganisms from their local environments. A 16S rRNA gene database addresses limitations of public repositories by providing chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies.
MorphoBank is a web application with tools and archives for evolutionary research, specifically systematics (the science of determining the evolutionary relationships among species). Study of the phenotype, which is often visually-based, is central to contemporary systematics and taxonomic research. MorphoBank was developed specifically to provide much needed tools for the expansion and modernization of phylogenetic work on the phenotype
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The Japanese Genotype-phenotype Archive (JGA) is a service for permanent archiving and sharing of all types of individual-level genetic and de-identified phenotypic data resulting from biomedical research projects. The JGA contains exclusive data collected from individuals whose consent agreements authorize data release only for specific research use or to bona fide researchers. Strict protocols govern how information is managed, stored and distributed by the JGA. Once processed, all data are encrypted. Users can contact the JGA team from here. JGA services are provided in collaboration with National Bioscience Database Center (NBDC) of Japan Science and Technology Agency.
The Biological and Chemical Oceanography Data Management Office (BCO-DMO) is a publicly accessible earth science data repository created to curate, publicly serve (publish), and archive digital data and information from biological, chemical and biogeochemical research conducted in coastal, marine, great lakes and laboratory environments. The BCO-DMO repository works closely with investigators funded through the NSF OCE Division’s Biological and Chemical Sections and the Division of Polar Programs Antarctic Organisms & Ecosystems. The office provides services that span the full data life cycle, from data management planning support and DOI creation, to archive with appropriate national facilities.
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Contains data on patients who have been tested for COVID-19 (whether positive or negative) in participating health institutions in Brazil. This initiative makes available three kinds of pseudonymized data: demographics (gender, year of birth, and region of residency), clinical and laboratory exams. Additional hospitalization information - such as data on transfers and outcomes - is provided when available. Clinical, lab, and hospitalization information is not limited to COVID-19 data, but covers all health events for these individuals, starting November 1st 2019, to allow for comorbidity studies. Data are deposited periodically, so that health information for a given individual is continuously updated to time of new version upload.
The Paleobiology Database (PaleoBioDB) is a non-governmental, non-profit public resource for paleontological data. It has been organized and operated by a multi-disciplinary, multi-institutional, international group of paleobiological researchers. Its purpose is to provide global, collection-based occurrence and taxonomic data for organisms of all geological ages, as well data services to allow easy access to data for independent development of analytical tools, visualization software, and applications of all types. The Database’s broader goal is to encourage and enable data-driven collaborative efforts that address large-scale paleobiological questions.
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The Tropical Data Hub (TDH) Research Data repository makes data collections and datasets generated by James Cook University researchers searchable and accessible. This increases their visibility and facilitates sharing and collaboration both within JCU and externally. Services provided include archival storage, access controls (open access preferred), metadata review and DOI minting.
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Addis Ababa University Research Data Repository holds multi disciplinary datasets produced by members of the university.
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The web service correspSearch aggregates metadata of letters from printed and digital scholarly editions and publications. It offers the aggregated correspondence metadata both via a feature-rich interface and via an API. The letter metadata are provided by scholarly projects of different institutions in a standardised, TEI-XML-based exchange format and and by using IDs from authority files (GeoNames, GND, VIAF etc.). The web service itself does not set a spatial or temporal collection focus. Currently, the time frame of the aggregated correspondence data ranges from 1500 to the 20th century.