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Found 42 result(s)
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>>>!!!<<< 2019-12-04: The repository is no longer available >>>!!!<<<
Presented here are excitation cross sections measured for a select number of transitions using the Merged Electron-Ion Beams Energy Loss (MEIBEL) experiment. This is a collaboration of JILA and the Multicharged Ion Research Facility (MIRF) at Oak Ridge National Laboratory (ORNL), where the apparatus is located. Since there exist a nearly infinite number of transitions in multicharged ions we have chosen a few that serve as benchmarks for theoretical efforts. Of particular interest are forbidden transitions which are often dominated by dielectronic resonances whose positions and magnitudes are difficult to predict theoretically.
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The Northern California Earthquake Data Center (NCEDC) is a permanent archive and distribution center primarily for multiple types of digital data relating to earthquakes in central and northern California. The NCEDC is located at the Berkeley Seismological Laboratory, and has been accessible to users via the Internet since mid-1992. The NCEDC was formed as a joint project of the Berkeley Seismological Laboratory (BSL) and the U.S. Geological Survey (USGS) at Menlo Park in 1991, and current USGS funding is provided under a cooperative agreement for seismic network operations.
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The CMU Multi-Modal Activity Database (CMU-MMAC) database contains multimodal measures of the human activity of subjects performing the tasks involved in cooking and food preparation. The CMU-MMAC database was collected in Carnegie Mellon's Motion Capture Lab. A kitchen was built and to date twenty-five subjects have been recorded cooking five different recipes: brownies, pizza, sandwich, salad, and scrambled eggs.
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A bioinformatic database of antimicrobial resistance genes, their products and associated phenotypes.
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The European Monitoring and Evaluation Programme (EMEP) is a scientifically based and policy driven programme under the Convention on Long-range Transboundary Air Pollution (CLRTAP) for international co-operation to solve transboundary air pollution problems.
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HyperLeda is an information system for astronomy: It consists in a database and tools to process that data according to the user's requirements. The scientific goal which motivates the development of HyperLeda is the study of the physics and evolution of galaxies. LEDA was created more than 20 years ago, in 1983, and became HyperLeda after the merging with Hypercat in 2000
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<<<!!!<<< This database doesn't exist anymore. 2017-09-05 >>>!!!>>>
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nmrshiftdb is a NMR database (web database) for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. Last not least, it features peer-reviewed submission of datasets by its users. The nmrshiftdb2 software is open source, the data is published under an open content license. Please consult the documentation for more detailed information. nmrshiftdb2 is the continuation of the NMRShiftDB project with additional data and bugfixes and changes in the software.
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The GOES Space Environment Monitor archive is an important component of the National Space Weather Program --a interagency program to provide timely and reliable space environment observations and forecasts. GOES satellites carry onboard a Space Environment Monitor subsystem that measures X-rays, Energetic Particles and Magnetic Field at the Spacecraft.
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EMPIAR, the Electron Microscopy Public Image Archive, is a public resource for raw, 2D electron microscopy images. Here, you can browse, upload, download and reprocess the thousands of raw, 2D images used to build a 3D structure.
The purpose of EMPIAR is to provide an easy access to the state-of-the-art raw data to facilitate methods development and validation, which will lead to better 3D structures. It complements the Electron Microscopy Data Bank (EMDB), where 3D images are stored, and uses the fault-tolerant Aspera platform for data transfers
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The Mikulski Archive for Space Telescopes (MAST) is a NASA funded project to support and provide to the astronomical community a variety of astronomical data archives, with the primary focus on scientifically related data sets in the optical, ultraviolet, and near-infrared parts of the spectrum. MAST is located at the Space Telescope Science Institute (STScI).
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AceView provides a curated, comprehensive and non-redundant sequence representation of all public mRNA sequences (mRNAs from GenBank or RefSeq, and single pass cDNA sequences from dbEST and Trace). These experimental cDNA sequences are first co-aligned on the genome then clustered into a minimal number of alternative transcript variants and grouped into genes. Using exhaustively and with high quality standards the available cDNA sequences evidences the beauty and complexity of mammals’ transcriptome, and the relative simplicity of the nematode and plant transcriptomes. Genes are classified according to their inferred coding potential; many presumably non-coding genes are discovered. Genes are named by Entrez Gene names when available, else by AceView gene names, stable from release to release.
Alternative features (promoters, introns and exons, polyadenylation signals) and coding potential, including motifs, domains, and homologies are annotated in depth; tissues where expression has been observed are listed in order of representation; diseases, phenotypes, pathways, functions, localization or interactions are annotated by mining selected sources, in particular PubMed, GAD and Entrez Gene, and also by performing manual annotation, especially in the worm.
In this way, both the anatomy and physiology of the experimentally cDNA supported human, mouse and nematode genes are thoroughly annotated.
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>>>!!!<<< 2019-12-04: The repository is no longer available >>>!!!<<<
Presented here are experimental ionization cross sections measured using the Electron-Ion Crossed Beams apparatus in the Multicharged Ion Research Facility (MIRF) at the Physics Division of Oak Ridge National Laboratory (ORNL). The data are given in both graphical and tabular form along with the reference to the original publication of the experimental results. Also presented in the figures are theoretical cross sections supporting the experiments.
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>>>!!!<<< This site is going away on April 1, 2021. General access to the site has been disabled and community users will see an error upon login. >>>!!!<<<
Socrata’s cloud-based solution allows government organizations to put their data online, make data-driven decisions, operate more efficiently, and share insights with citizens.
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OrtholugeDB contains Ortholuge-based orthology predictions for completely sequenced bacterial and archaeal genomes. It is also a resource for reciprocal best BLAST-based ortholog predictions, in-paralog predictions (recently duplicated genes) and ortholog groups in Bacteria and Archaea. The Ortholuge method improves the specificity of high-throughput orthology prediction.
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As a research data hub for social and economic history, Emporion enables the free and standards-compliant publication of time series, historical statistical and panel data, georeferenced vector data, text mining analyses and data papers. Emporion is also open to contributions from the fields of business and environmental history and the history of technology. Emporion's supporting institutions are the DFG Priority Programme 1859 'Experience and Expectations. Historical Foundations of Economic Behavior' and the Gesellschaft für Sozial- und Wirtschaftsgeschichte in conjunction with the Staatsbibliothek zu Berlin – Preußischer Kulturbesitz.
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LinkedEarth is an EarthCube-funded project aiming to better organize and share Earth Science data, especially paleoclimate data.
LinkedEarth facilitates the work of scientists by empowering them to curate their own data and to build new tools centered around those.
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This interface provides access to several types of data related to the Chesapeake Bay. Bay Program databases can be queried based upon user-defined inputs such as geographic region and date range. Each query results in a downloadable, tab- or comma-delimited text file that can be imported to any program (e.g., SAS, Excel, Access) for further analysis. Comments regarding the interface are encouraged. Questions in reference to the data should be addressed to the contact provided on subsequent pages.
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VectorBase provides data on arthropod vectors of human pathogens. Sequence data, gene expression data, images, population data, and insecticide resistance data for arthropod vectors are available for download. VectorBase also offers genome browser, gene expression and microarray repository, and BLAST searches for all VectorBase genomes. VectorBase Genomes include Aedes aegypti, Anopheles gambiae, Culex quinquefasciatus, Ixodes scapularis, Pediculus humanus, Rhodnius prolixus. VectorBase is one the Bioinformatics Resource Centers (BRC) projects which is funded by National Institute of Allergy and Infectious Diseases (NAID).
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We are working on a new version of ALFRED web interface. The current web interface will not be available from December 15th, 2023. There will be a period where a public web interface is not available for viewing ALFRED data. Expected date for the deployment of the new ALFRED web interface with minimum functions is March 1st, 2024
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ALFRED is a free, web-accessible, curated compilation of allele frequency data on DNA sequence polymorphisms in anthropologically defined human populations. ALFRED is distinct from such databases as dbSNP, which catalogs sequence variation.
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iRefWeb is an interface to a relational database containing the latest build of the interaction Reference Index (iRefIndex) which integrates protein interaction data from ten different interaction databases: BioGRID, BIND, CORUM, DIP, HPRD, INTACT, MINT, MPPI, MPACT and OPHID.
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VertNet is a NSF-funded collaborative project that makes biodiversity data free and available on the web. VertNet is a tool designed to help people discover, capture, and publish biodiversity data. It is also the core of a collaboration between hundreds of biocollections that contribute biodiversity data and work together to improve it. VertNet is an engine for training current and future professionals to use and build upon best practices in data quality, curation, research, and data publishing. Yet, VertNet is still the aggregate of all of the information that it mobilizes. To us, VertNet is all of these things and more.
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HIstome: The Histone Infobase is a database of human histones, their post-translational modifications and modifying enzymes. HIstome is a combined effort of researchers from two institutions, Advanced Center for Treatment, Research and Education in Cancer (ACTREC), Navi Mumbai and Center of Excellence in Epigenetics, Indian Institute of Science Education and Research (IISER), Pune.
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Swedish National Data Service (SND) is a research data infrastructure designed to assist researchers in preserving, maintaining, and disseminating research data in a secure and sustainable manner. The SND Search function makes it easy to find, use, and cite research data from a variety of scientific disciplines. Together with an extensive network of almost 40 Swedish higher education institutions and other research organisations, SND works for increased access to research data, nationally as well as internationally.
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- Plant Sciences
- Biology
- Plant Genetics
- Plant Breeding
- Basic Forest Research
- Plant Systematics and Evolution
- Life Sciences
- Agriculture, Forestry, Horticulture and Veterinary Medicine
- Agriculture, Forestry, Horticulture and Veterinary Medicine
- Bioinformatics and Theoretical Biology
- Basic Biological and Medical Research
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TreeGenes is a genomic, phenotypic, and environmental data resource for forest tree species. The TreeGenes database and Dendrome project provide custom informatics tools to manage the flood of information.The database contains several curated modules that support the storage of data and provide the foundation for web-based searches and visualization tools. GMOD GUI tools such as CMAP for genetic maps and GBrowse for genome and transcriptome assemblies are implemented here. A sample tracking system, known as the Forest Tree Genetic Stock Center, sits at the forefront of most large-scale projects. Barcode identifiers assigned to the trees during sample collection are maintained in the database to identify an individual through DNA extraction, resequencing, genotyping and phenotyping. DiversiTree, a user-friendly desktop-style interface, queries the TreeGenes database and is designed for bulk retrieval of resequencing data. CartograTree combines geo-referenced individuals with relevant ecological and trait databases in a user-friendly map-based interface. ---- The Conifer Genome Network (CGN) is a virtual nexus for researchers working in conifer genomics. The CGN web site is maintained by the Dendrome Project at the University of California, Davis.
- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
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Except where otherwise noted, content on this site is licensed under a
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-05-02
