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Found 27 result(s)

SMU Research Data Repository

Singapore Management University Research Data Repository

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SMU Research Data Repository (SMU RDR) is a tool and service for researchers from Singapore Management University (SMU) to store, share and publish their research data. SMU RDR accepts a wide range of research data and outputs generated from research projects.

The Cell Vision

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TheCellVision.org is a freely available and web-accessible image visualization and data browsing tool that serves as a central repository for fluorescence microscopy images and associated quantitative data produced by high-content screening experiments. Currently, TheCellVision.org hosts images and associated analysis results from two published high- content screening (HCS) projects focused on the budding yeast Saccharomyces cerevisiae. TheCellVision.org allows users to access, visualize and explore fluorescence microscopy images, and to search, compare, and extract data related to subcellular compartment morphology, protein abundance, and localization. Each dataset can be queried independently or as part of a search across multiple datasets using the advanced search option. The website also hosts computational tools associated with the available datasets, which can be applied to other projects and cell systems, a feature we demonstrate using published images of mammalian cells. Providing access to HCS data through websites such as TheCellVision.org enables new discovery and independent re-analyses of imaging data."

Allen Brain Map

Data Portal

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The Allen Brain Atlas provides a unique online public resource integrating extensive gene expression data, connectivity data and neuroanatomical information with powerful search and viewing tools for the adult and developing brain in mouse, human and non-human primate

Environmental Dataset Gateway

EPA's official open data catalog

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<<<!!!<<< This repository is no longer available. The Environmental Dataset Gateway (EDG) has provided access to EPA's Open Data resources. Metadata records contributed by EPA Regions, Program Offices, and Research Laboratories that link to geospatial and non-geospatial resources (e.g., data, Web services, or applications) are now discoverable through Data.gov. https://www.re3data.org/repository/r3d100010078 >>>!!!>>>

JGI MycoCosm

MycoCosm - the fungal genomics resource

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MycoCosm, the DOE JGI’s web-based fungal genomics resource, which integrates fungal genomics data and analytical tools for fungal biologists. It provides navigation through sequenced genomes, genome analysis in context of comparative genomics and genome-centric view. MycoCosm promotes user community participation in data submission, annotation and analysis.

Hardwood Genomics Project

HWG

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This database serves forest tree scientists by providing online access to hardwood tree genomic and genetic data, including assembled reference genomes, transcriptomes, and genetic mapping information. The web site also provides access to tools for mining and visualization of these data sets, including BLAST for comparing sequences, Jbrowse for browsing genomes, Apollo for community annotation and Expression Analysis to build gene expression heatmaps.

OpenAgrar

OA

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OpenAgrar is an open access repository which publishes, stores, archives and distributes publications, publication references and research data. Its resources can be searched and used by everyone. It contains amongst others theses, reports, conference proceedings, journal articles, books, institutional documents, research datasets, videos and interviews.

PSI Open Data Provider

PSI Public Data Repository

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PSI Open Data Provider allows users to consult open data related to experiments carried out at PSI. Data made available includes scientific datasets collected during experiments and publications if any. Users can search for data based on related metadata (both their own data and other people's public data).

VIPERdb

Virus Particle Explorer database

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VIPERdb is a database for icosahedral virus capsid structures . The emphasis of the resource is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration. In addition, all virus capsids are placed in a single icosahedral orientation convention, facilitating comparison between different structures. The web site includes powerful search utilities , links to other relevant databases, background information on virus capsid structure, and useful database interface tools.

Collaborative Research in Computational Neuroscience

CRCNS

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This website makes data available from the first round of data sharing projects that were supported by the CRCNS funding program. To enable concerted efforts in understanding the brain experimental data and other resources such as stimuli and analysis tools should be widely shared by researchers all over the world. To serve this purpose, this website provides a marketplace and discussion forum for sharing tools and data in neuroscience. To date we host experimental data sets of high quality that will be valuable for testing computational models of the brain and new analysis methods. The data include physiological recordings from sensory and memory systems, as well as eye movement data.

Universal PBM Resource for Oligonucleotide Binding Evaluation

UniPROBE

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The UniPROBE (Universal PBM Resource for Oligonucleotide Binding Evaluation) database hosts data generated by universal protein binding microarray (PBM) technology on the in vitro DNA binding specificities of proteins. This initial release of the UniPROBE database provides a centralized resource for accessing comprehensive data on the preferences of proteins for all possible sequence variants ('words') of length k ('k-mers'), as well as position weight matrix (PWM) and graphical sequence logo representations of the k-mer data. In total, the database currently hosts DNA binding data for 406 nonredundant proteins from a diverse collection of organisms, including the prokaryote Vibrio harveyi, the eukaryotic malarial parasite Plasmodium falciparum, the parasitic Apicomplexan Cryptosporidium parvum, the yeast Saccharomyces cerevisiae, the worm Caenorhabditis elegans, mouse, and human. The database's web tools (on the right) include a text-based search, a function for assessing motif similarity between user-entered data and database PWMs, and a function for locating putative binding sites along user-entered nucleotide sequences

Animal Genome Tracks on GBrowse

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Genome track alignments using GBrowse on this site are featured with: (1) Annotated and predicted genes and transcripts; (2) QTL / SNP Association tracks; (3) OMIA genes; (4) Various SNP Chip tracks; (5) Other mapping fetures or elements that are available.

St Andrews Research portal - Research Data

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The St Andrews research portal features the research activities within the University of St Andrews.

OEDataRep

INGV - Osservatorio Etneo Open Data repository

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Open Data repository focused on dataset publication by INGV OE - Osservatorio Etneo. The Catania-Osservatorio Etneo Section is a public scientific institution of the National Institute of Geophysics and Volcanology (INGV) which carries out research, monitoring and surveillance activities in the fields of geophysics and volcanology.

Virtual Liver Network

VLN

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<<<!!!<<<no longer avialable>>>!!!>>>

SeedMe

Stream, Encode, Explore and Disseminate My Experiments

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<<<!!!<<< All user content from this site has been deleted. Visit SeedMeLab (https://seedmelab.org/) project as a new option for data hosting. >>>!!!>>> SeedMe is a result of a decade of onerous experience in preparing and sharing visualization results from supercomputing simulations with many researchers at different geographic locations using different operating systems. It’s been a labor–intensive process, unsupported by useful tools and procedures for sharing information. SeedMe provides a secure and easy-to-use functionality for efficiently and conveniently sharing results that aims to create transformative impact across many scientific domains.

Pedestrian Dynamics Data Archive

Data archive of experimental data from studies about pedestrian dynamics

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This data archive of experiments studying the dynamics of pedestrians is build up by the Institute for Advanced Simulation 7: Civil Safety Research of Forschungszentrum Jülich. The landing page provides our own data of experiments. Data of research colleagues are listed within the data archive at https://ped.fz-juelich.de/extda For most of the experiments, the video recordings, as well as the resulting trajectories of single pedestrians, are available. The experiments were performed under laboratory conditions to focus on the influence of a single variable. You are very welcome to use our data for further research, as long as you name the source of the data. If you have further questions feel free to contact Maik Boltes.

LabKey Open Research Portal

formerly: Zika Open-Research Portal

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In response to emerging pathogens, LabKey launched the Open Research Portal in 2016 to help facilitate collaborative research. It was initially created as a platform for investigators to make Zika research data, commentary and results publicly available in real-time. It now includes other viruses like SARS-CoV-2 where there is a compelling need for real-time data sharing. Projects are freely available to researchers. If you are interested in sharing real-time data through the portal, please contact LabKey to get started.

KORDS

King's College London Open Research Data System

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KORDS is a research data repository service providing long term storage and public access for datasets that support published research and/or have long term value.

York Research Database

YRD

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Welcome to the York Research Database, where you can find all our research staff, projects, publications and organisational units, and explore the connections between them all. The university of York is a member of the Russell Group of research-intensive universities.

Oxford Brookes University: RADAR

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RADAR (Research And Digital Assets Repository) is the institutional repository of Oxford Brookes University. The role of RADAR is to share the intellectual product of Oxford Brookes freely and openly with the staff and students of Oxford Brookes or with the global academic and public community. ​RADAR has a variety of research collections (primarily containing original research publications) and teaching collections (primarily containing resources that support teaching at Oxford Brookes University). Some of the collections​ and resources on RADAR are freely accessible to the general public and other collections​ and resources are only accessible by current Oxford Brookes staff and students.

European XFEL Data Portal

European XFEL Metadata Catalogue

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European XFEL Data Portal is provided by myMdC, allowing users to access the metadata of scientific data taken at the European XFEL facility. Datasets are linked to experiment proposals, annotated by data collection types, samples and are assigned DOIs to be referenced in publications. myMdC helps data management activities and allows users to find open and own proposals data based on the metadata.

ZFDM repository

FDR@UHH

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Research Data Repository of the Universität Hamburg

Loughborough Research Repository

Loughborough University Research Repository

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Loughborough Research Repository is the institutional repository of Loughborough University powered by figshare.

METIS

FMI’s Research Data Repository

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Finnish Meteorological Institute (FMI) research data repository METIS is provided by EUDAT and enables the institute data to be preserved, discovered, and accessed. FMI covers a wide range of research on weather, sea, climate and space. According to the FMI's Research Data policy , publicly funded research data must be made available to the widest possible audience (under CC BY license, at the minimum), as the best way to maximize the data impact but also to do justice to all the hard labor put into collecting, cleaning, and analyzing the data.